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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2799192_2799618_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
2799192 - 2799618
Intron Length:
427

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GTG|GTAATTTCT
5'SS Class:
major
3'SS Sequence:
GTCTGTCTTGCAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CACTGAA
U12 Branch Point Sequence:
GTCACTGAACTG
Flanking Amino Acid:
LRKGASVEHVCHRIHRSLAS
Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.1
0.69
1
76
33.7
Major BPS
62
0.3
1
53
34.1
Major PPT
79.5
0.66
0.9
72.9
37.4
Minor 5ss
43
-0.8
2.8
56.8
42.6
Minor BPS
34.4
-1.3
2.2
35.44
40.7

Associated Gene:

Gene:
DRG2
Ensembl Gene ID:
ENSAPLG00000007342
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007667
2798228 - 2806276
8049