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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2802800_2803670_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2802800 - 2803670

Intron Length:
871

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGCTGA

5'SS Class:
major

3'SS Sequence:
CCTCTCTTCTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTGAT

U12 Branch Point Sequence:
TTCTCCCTGATA

Flanking Amino Acid:
LPGIIEGAAQGKGRGRQVIA

Intron Amino Acid Position:
126

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.5
0.39
1.3
58
43.7

Major BPS
66.4
0.41
1.1
56.9
40.5

Major PPT
81.6
0.71
0.7
79.6
25.7

Minor 5ss
38.2
-1.3
3.1
47.9
47.7

Minor BPS
64.1
0.44
1.7
75.03
36.6

Associated Gene:

Gene:
DRG2

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2798228 - 2806276
8049