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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2818566_2818698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2818566 - 2818698

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTGATGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAA

U12 Branch Point Sequence:

GCTTTCCTAAGG

Flanking Amino Acid:

WDPIIAWAEKRYNVAIGSST

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

59.6

0.24

1.3

58.7

39.9

Major PPT

65.9

0.36

1.1

57.6

47.3

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.4

-0.2

56.08

45.2

Associated Gene:

Gene:

ATPAF2

Ensembl Gene ID:

ENSAPLG00000007932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008252

2776379 - 2820248

43870