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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2818812_2819135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2818812 - 2819135

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TATTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TTTGGGTTTATT

Flanking Amino Acid:

LASYNMWALQGIEYVITQLK

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

83.2

0.75

0.8

74.2

36.2

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

43.7

-0.4

2.7

71.2

46.2

Associated Gene:

Gene:

ATPAF2

Ensembl Gene ID:

ENSAPLG00000007932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008252

2776379 - 2820248

43870