Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2871309_2871407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2871309 - 2871407

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAGAA

5'SS Class:

major

3'SS Sequence:

ACTTTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

ACTTTCTTCACA

Flanking Amino Acid:

QNASNGVLNELAGLDLGTNS

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

67.4

33.5

Major BPS

77.5

0.68

79.6

Major PPT

81.7

0.71

0.8

76.1

31.8

Minor 5ss

29.8

-2.3

3.3

37.8

Minor BPS

64.6

0.45

1.7

72.86

39.5

Associated Gene:

Gene:

TOM1L2

Ensembl Gene ID:

ENSAPLG00000008391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043210

2855635 - 2885550

29916

ENSAPLT00000034159

2856686 - 2886550

29865