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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2873898_2883025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2873898 - 2883025

Intron Length:

9128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CTGCACTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAC

U12 Branch Point Sequence:

TCTCGCTGCACT

Flanking Amino Acid:

LDVRKQNTGVIPVAQSSVMD

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

-0.3

1.5

44.3

Major PPT

63.4

0.3

0.9

54.5

36.2

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

46.5

-0.1

2.3

70.08

46.5

Associated Gene:

Gene:

TOM1L2

Ensembl Gene ID:

ENSAPLG00000008391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031612

2856686 - 2886550

29865

ENSAPLT00000008771

2848363 - 2885550

37188

ENSAPLT00000043210

2855635 - 2885550

29916

ENSAPLT00000034159

2856686 - 2886550

29865