Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2899432_2899530_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2899432 - 2899530

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCGGTA

5'SS Class:

major

3'SS Sequence:

TGCGTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAT

U12 Branch Point Sequence:

ACCCCCCCAAGG

Flanking Amino Acid:

SAGGTAAPLQALVSGGTILA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

60.3

40.6

Major BPS

57.3

0.18

1.3

48.8

46.3

Major PPT

72.5

0.51

0.9

62.3

39.8

Minor 5ss

31.8

-2.1

3.8

46.3

Minor BPS

39.9

-0.9

40.1

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019759

2899348 - 2900294

947