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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3022314_3025204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3022314 - 3025204

Intron Length:

2891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

CTCTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

CAGGTGTGAATA

Flanking Amino Acid:

FLPLVHDIIKCMDKDSQDVH

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.2

57.1

41.9

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

35.3

-1.7

3.6

46.9

Minor BPS

40.6

-0.7

2.1

43.99

39.1

Associated Gene:

Gene:

MED9

Ensembl Gene ID:

ENSAPLG00000001250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001238

3021949 - 3025533

3585