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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3053344_3054882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3053344 - 3054882

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGTCTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AAAGCTTTAAAT

Flanking Amino Acid:

QEHSLGVLAVLFVKFSMPSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.8

0.65

0.9

77.1

37.1

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

59.4

0.37

1.5

69.84

40.7

Associated Gene:

Gene:

COPS3

Ensembl Gene ID:

ENSAPLG00000004443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024312

3052333 - 3062126

9794

ENSAPLT00000019008

3050981 - 3062126

11146