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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3054996_3055115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3054996 - 3055115

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTGCTGTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

ATTTTCTTTTCT

Flanking Amino Acid:

GEHIRYATDTFAGLCHQLTN

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

30.4

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

70.7

0.47

69.4

41.7

Minor 5ss

42.1

-0.9

2.8

43.6

Minor BPS

-0.2

3.6

81.73

39.7

Associated Gene:

Gene:

COPS3

Ensembl Gene ID:

ENSAPLG00000004443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024312

3052333 - 3062126

9794

ENSAPLT00000019008

3050981 - 3062126

11146

ENSAPLT00000004605

3051202 - 3062126

10925