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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3055166_3055969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3055166 - 3055969

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TAATTTCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATTGTCTGAAAG

Flanking Amino Acid:

LTNALVERKQPLRGISILRQ

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

73.2

0.52

69.3

41.3

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

51.1

-0.1

1.7

59.64

41.9

Associated Gene:

Gene:

COPS3

Ensembl Gene ID:

ENSAPLG00000004443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024312

3052333 - 3062126

9794

ENSAPLT00000019008

3050981 - 3062126

11146

ENSAPLT00000004605

3051202 - 3062126

10925