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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3058404_3059302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3058404 - 3059302

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTCTTTAAGA

Flanking Amino Acid:

TSQIVGRFIKPLSNAYHELA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.8

78.5

33.5

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

72.9

0.71

1.6

79.83

36.4

Associated Gene:

Gene:

COPS3

Ensembl Gene ID:

ENSAPLG00000004443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004605

3051202 - 3062126

10925

ENSAPLT00000024312

3052333 - 3062126

9794

ENSAPLT00000019008

3050981 - 3062126

11146