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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3060959_3061577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3060959 - 3061577

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGTAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

PAMLHNIDQEMLKCIELDER

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

59.8

0.24

1.5

60.1

46.3

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

COPS3

Ensembl Gene ID:

ENSAPLG00000004443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019008

3050981 - 3062126

11146

ENSAPLT00000004605

3051202 - 3062126

10925

ENSAPLT00000024312

3052333 - 3062126

9794