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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3090542_3090974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3090542 - 3090974

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTCCT

5'SS Class:

major

3'SS Sequence:

TGCTTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTAAT

U12 Branch Point Sequence:

ACTACGTTAATA

Flanking Amino Acid:

SPVNTTVSGYDIMKSKSNPD

Intron Amino Acid Position:

978

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

42.9

Major BPS

0.55

1.2

73.3

39.1

Major PPT

81.7

0.71

0.8

73.4

37.2

Minor 5ss

32.4

-2

2.8

40.6

Minor BPS

54.7

0.14

2.1

66.17

40.7

Associated Gene:

Gene:

MPRIP

Ensembl Gene ID:

ENSAPLG00000030840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021195

3085803 - 3147269

61467

ENSAPLT00000046605

3085803 - 3147269

61467

ENSAPLT00000020567

3086628 - 3142246

55619

ENSAPLT00000044034

3082032 - 3147269

65238

ENSAPLT00000003376

3082032 - 3147269

65238

ENSAPLT00000039924

3085803 - 3129890

44088

ENSAPLT00000047217

3085803 - 3147269

61467

ENSAPLT00000027217

3085803 - 3147269

61467

ENSAPLT00000046823

3085803 - 3122407

36605