Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_3111236_3112152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3111236 - 3112152

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

CATGCAATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTGTGTTTGATT

Flanking Amino Acid:

VRPTTAPDVTRKNFSLKLSV

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

62.6

0.28

51.6

41.4

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

54.4

0.22

1.8

70.84

41.1

Associated Gene:

Gene:

MPRIP

Ensembl Gene ID:

ENSAPLG00000030840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046823

3085803 - 3122407

36605

ENSAPLT00000039924

3085803 - 3129890

44088

ENSAPLT00000027217

3085803 - 3147269

61467

ENSAPLT00000021195

3085803 - 3147269

61467

ENSAPLT00000047217

3085803 - 3147269

61467