Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_3122688_3123942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3122688 - 3123942

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAC

U12 Branch Point Sequence:

CAGGCTTGAAAC

Flanking Amino Acid:

LKDPVLDSKEDESSMNGDRI

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

57.3

0.18

1.2

38.7

Major PPT

0.63

0.8

31.2

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

46.2

-0.3

1.6

49.22

Associated Gene:

Gene:

MPRIP

Ensembl Gene ID:

ENSAPLG00000030840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021195

3085803 - 3147269

61467

ENSAPLT00000046605

3085803 - 3147269

61467

ENSAPLT00000020567

3086628 - 3142246

55619

ENSAPLT00000044034

3082032 - 3147269

65238

ENSAPLT00000003376

3082032 - 3147269

65238

ENSAPLT00000039924

3085803 - 3129890

44088

ENSAPLT00000027217

3085803 - 3147269

61467

ENSAPLT00000047217

3085803 - 3147269

61467