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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3150595_3153831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3150595 - 3153831

Intron Length:

3237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCGTTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

TGCCCCATAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

78.2

0.63

0.8

72.2

32.4

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

49.1

-0

1.9

62.03

42.7

Associated Gene:

Gene:

TNFRSF13B

Ensembl Gene ID:

ENSAPLG00000021324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022184

3150270 - 3158835

8566