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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3153973_3154778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3153973 - 3154778

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGCCTTCCCACA

Flanking Amino Acid:

SAVRRCAALCESMVCNRKAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

74.5

0.55

0.8

68.4

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

37.6

-0.9

1.9

45.76

37.4

Associated Gene:

Gene:

TNFRSF13B

Ensembl Gene ID:

ENSAPLG00000021324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047713

3151872 - 3158835

6964

ENSAPLT00000022184

3150270 - 3158835

8566