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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3223830_3257637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3223830 - 3257637

Intron Length:

33808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTTCTTATAG

Flanking Amino Acid:

MHLCVWESAKSCICHMCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

87.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.8

0.81

0.8

84.1

30.9

Minor 5ss

37.9

-1.4

2.9

52.2

44.4

Minor BPS

56.8

0.07

1.8

63.99

43.9

Associated Gene:

Gene:

USP22

Ensembl Gene ID:

ENSAPLG00000002524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021997

3167127 - 3257734

90608