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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3306478_3307177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3306478 - 3307177

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CGTTTCGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CTGTTTGTAACC

Flanking Amino Acid:

GRGIAKHLAKAALDFVVEED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

74.6

0.55

0.9

68.7

37.2

Minor 5ss

-2.3

3.4

39.4

Minor BPS

52.2

0.05

64.7

41.9

Associated Gene:

Gene:

NATD1

Ensembl Gene ID:

ENSAPLG00000007590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007866

3306361 - 3310943

4583