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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3308027_3311194_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3308027 - 3311194

Intron Length:

3168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATTTACA

5'SS Class:

major

3'SS Sequence:

CGGCACCGCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTAAA

U12 Branch Point Sequence:

CGGCGCTTAAAG

Flanking Amino Acid:

HKSLLSLPPPGGAGGGCTGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

66.1

39.2

Major BPS

0.25

1.3

63.9

40.2

Major PPT

-0.1

1.1

40.1

32.8

Minor 5ss

41.7

-0.9

2.4

43.7

43.5

Minor BPS

46.1

-0.4

46.75

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046245

3307813 - 3311853

4041