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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3454759_3455629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3454759 - 3455629

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACAAT

5'SS Class:

major

3'SS Sequence:

TCCCAACCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAC

U12 Branch Point Sequence:

ATGCACTTAACG

Flanking Amino Acid:

LPQPTQTQQKRTPQVIGVMQ

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

71.4

40.2

Major BPS

68.3

0.45

69.6

32.8

Major PPT

61.9

0.27

0.9

33.8

Minor 5ss

39.3

-1.2

3.3

47.3

Minor BPS

62.4

0.25

1.6

64.71

42.6

Associated Gene:

Gene:

CPSF4

Ensembl Gene ID:

ENSAPLG00000018571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046939

3453010 - 3458969

5960