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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3455703_3456164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3455703 - 3456164

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TGGTCTAAACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTGGTCTAAACC

Flanking Amino Acid:

CPEGPTCKFMHPRFELPMGT

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

71.9

39.5

Major BPS

75.8

0.64

65.8

Major PPT

60.4

0.23

1.1

53.1

Minor 5ss

36.1

-1.6

2.9

48.1

41.6

Minor BPS

58.4

0.24

1.8

69.13

Associated Gene:

Gene:

CPSF4

Ensembl Gene ID:

ENSAPLG00000018571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046939

3453010 - 3458969

5960