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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3457452_3457978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3457452 - 3457978

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CATCCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTGCTCACCC

Flanking Amino Acid:

EFFLKAACGKGGMCPFRHIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

25.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.8

73.1

31.4

Minor 5ss

27.1

-2.6

3.8

42.5

44.3

Minor BPS

48.3

-0.1

2.2

66.26

45.6

Associated Gene:

Gene:

CPSF4

Ensembl Gene ID:

ENSAPLG00000018571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046939

3453010 - 3458969

5960