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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3460601_3460802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3460601 - 3460802

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACGTAGG

5'SS Class:

major

3'SS Sequence:

TGTCTTCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

AAAAAGTTAGTC

Flanking Amino Acid:

VKKAFKLYNDMKKRGLTPTE

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

65.8

45.4

Major BPS

72.7

0.57

72.1

31.1

Major PPT

78.5

0.64

0.8

77.4

31.3

Minor 5ss

36.5

-1.5

46.3

42.3

Minor BPS

39.1

-0.8

2.2

44.97

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007143

3458872 - 3464116

5245