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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3461022_3461632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3461022 - 3461632

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TTTTTTTTTTTA

Flanking Amino Acid:

DLRMCFDVLKEIVQKGHVPT

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.4

33.5

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-1.6

2.6

43.2

43.8

Minor BPS

42.8

-0.5

3.5

69.82

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007143

3458872 - 3464116

5245