Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_3462434_3462526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3462434 - 3462526

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAGGA

5'SS Class:

major

3'SS Sequence:

GCTGGATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

ATTTGTGCAACC

Flanking Amino Acid:

AGLNSSTEALVPDAAVVSLG

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

0.9

63.9

36.2

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

70.2

0.46

61.7

43.6

Minor 5ss

24.5

-2.9

3.1

26.4

38.9

Minor BPS

-0.4

2.4

64.51

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007143

3458872 - 3464116

5245