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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3471491_3472364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3471491 - 3472364

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCGCTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GGTTCTGTAATC

Flanking Amino Acid:

DGPKELSRREREEIEKQKAK

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

67.1

0.38

62.6

37.7

Minor 5ss

33.7

-1.9

3.4

49.9

46.4

Minor BPS

55.9

0.16

67.48

38.5

Associated Gene:

Gene:

PDAP1

Ensembl Gene ID:

ENSAPLG00000006542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006801

3466901 - 3473230

6330