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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3583771_3584645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3583771 - 3584645

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTATTAACT

Flanking Amino Acid:

DTDAVRGQIVVSLQTRDRIG

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

41.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.8

0.85

0.8

85.7

33.4

Minor 5ss

33.4

-1.9

2.8

33.9

Minor BPS

75.1

0.87

1.5

89.99

33.4

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010945

3556801 - 3598846

42046

ENSAPLT00000021584

3581814 - 3598846

17033