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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3585318_3586116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3585318 - 3586116

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTACACTAATC

Flanking Amino Acid:

HQSPDLPEGYEQRTTVQGQV

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

80.7

31.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

91.6

0.94

0.6

87.6

22.6

Minor 5ss

36.5

-1.5

3.6

53.2

Minor BPS

55.1

0.14

73.51

36.9

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010945

3556801 - 3598846

42046

ENSAPLT00000021584

3581814 - 3598846

17033