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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3590216_3590901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3590216 - 3590901

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGAC

5'SS Class:

major

3'SS Sequence:

TACACACGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTATATATATCT

Flanking Amino Acid:

IEVSREEIFEESYRQIMKMR

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

70.3

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.3

0.28

54.2

40.2

Minor 5ss

39.1

-1.2

3.1

52.1

45.1

Minor BPS

49.1

0.01

74.93

41.4

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021584

3581814 - 3598846

17033

ENSAPLT00000010945

3556801 - 3598846

42046