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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3592760_3593736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3592760 - 3593736

Intron Length:

977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CCTCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

GCTGCCTGATTT

Flanking Amino Acid:

QINPDSSINPDHLSYFHFVG

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

0.27

1.3

53.3

44.2

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

48.7

-0

1.8

65.23

45.5

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010945

3556801 - 3598846

42046

ENSAPLT00000021584

3581814 - 3598846

17033