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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3593916_3594779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3593916 - 3594779

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTCATTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTTTCATTT

Flanking Amino Acid:

PELHKSLVWILENDITPVLD

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

100

1.24

0.5

100

Major PPT

74.5

0.55

69.7

41.2

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

47.9

-0

1.7

64.24

41.1

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021584

3581814 - 3598846

17033

ENSAPLT00000010945

3556801 - 3598846

42046