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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3594918_3595292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3594918 - 3595292

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCAA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCATCCCTGACT

Flanking Amino Acid:

VTEENKKEYVRLYVNWRFMR

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.3

39.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

84.5

0.78

0.7

77.5

31.3

Minor 5ss

36.2

-1.6

3.2

47.1

48.3

Minor BPS

66.4

0.6

1.7

81.02

40.6

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021584

3581814 - 3598846

17033

ENSAPLT00000010945

3556801 - 3598846

42046