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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3595414_3596922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3595414 - 3596922

Intron Length:

1509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATATA

5'SS Class:

strong_major

3'SS Sequence:

AATCCTTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AATCCTTTAACA

Flanking Amino Acid:

LKPFDQKELELIIGGLDKID

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

71.6

0.49

66.2

38.7

Minor 5ss

44.8

-0.6

2.7

59.5

45.1

Minor BPS

0.78

1.1

76.79

33.2

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021584

3581814 - 3598846

17033

ENSAPLT00000010945

3556801 - 3598846

42046