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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3597125_3597939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3597125 - 3597939

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTGAT

5'SS Class:

major

3'SS Sequence:

GTCTGTTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAAGT

Flanking Amino Acid:

VPLQGFKALQGSTGAAGPRL

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.1

77.5

32.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

61.7

0.26

1.2

67.1

Minor 5ss

34.5

-1.8

3.3

48.7

47.5

Minor BPS

63.8

0.51

1.7

83.97

37.1

Associated Gene:

Gene:

SMURF1

Ensembl Gene ID:

ENSAPLG00000010476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021584

3581814 - 3598846

17033

ENSAPLT00000010945

3556801 - 3598846

42046