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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3615877_3617082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3615877 - 3617082

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GACTTTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTGTCCTGACTT

Flanking Amino Acid:

LNSFRSHRGKDWINRRDDGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

72.3

0.5

65.5

40.7

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

55.6

0.26

1.8

72.28

45.1

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020494

3604384 - 3667098

62715

ENSAPLT00000010812

3615748 - 3667098

51351