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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3617217_3618428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3617217 - 3618428

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TCCTACTTACTC

Flanking Amino Acid:

DDDDVVILAETPKHQQLVRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

82.5

0.73

0.7

31.1

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

0.07

1.8

62.54

43.6

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020494

3604384 - 3667098

62715

ENSAPLT00000010812

3615748 - 3667098

51351