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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3620270_3623885_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3620270 - 3623885

Intron Length:

3616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTATCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GCTCCCAGAACC

Flanking Amino Acid:

INVKNCYDLNVLCNFLLENP

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

90.7

0.92

0.7

88.8

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

50.6

-0

1.8

63.11

41.5

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020494

3604384 - 3667098

62715

ENSAPLT00000010812

3615748 - 3667098

51351