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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3625823_3626108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3625823 - 3626108

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAC

5'SS Class:

strong_major

3'SS Sequence:

AACTGTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

GTGCCTGTAACT

Flanking Amino Acid:

YSYIDFKFEQGDVKIEKRMF

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

83.8

27.2

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

63.1

0.3

58.9

42.1

Minor 5ss

35.4

-1.7

2.8

44.9

43.2

Minor BPS

54.6

0.22

73.91

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010812

3615748 - 3667098

51351

ENSAPLT00000020494

3604384 - 3667098

62715