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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3630214_3664126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3630214 - 3664126

Intron Length:

33913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGGG

5'SS Class:

major

3'SS Sequence:

CTGTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTTCCTTTAACA

Flanking Amino Acid:

FSCPNPRCRKETCRKCQGLW

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

60.6

44.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

83.1

0.74

0.8

80.9

31.2

Minor 5ss

28.7

-2.4

3.5

38.3

46.7

Minor BPS

77.5

0.86

1.2

80.59

35.2

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020494

3604384 - 3667098

62715

ENSAPLT00000010812

3615748 - 3667098

51351