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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3664225_3666689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3664225 - 3666689

Intron Length:

2465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CTGTCTCTAATT

Flanking Amino Acid:

EKDDIKYRTSIEEKMTAARI

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

78.3

0.64

0.9

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

61.3

0.43

1.7

75.95

41.6

Associated Gene:

Gene:

RNF216

Ensembl Gene ID:

ENSAPLG00000010364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020494

3604384 - 3667098

62715

ENSAPLT00000010812

3615748 - 3667098

51351