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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3751875_3754188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3751875 - 3754188

Intron Length:

2314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCGCCTCTGATG

Flanking Amino Acid:

DRSLSLSSIKGHGRSEDDCG

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

34.5

Major BPS

0.72

38.9

Major PPT

63.4

0.3

0.9

41.5

Minor 5ss

34.6

-1.7

3.1

44.1

43.8

Minor BPS

45.9

-0.4

1.7

47.94

40.2

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525