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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3754660_3754870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3754660 - 3754870

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGTCCCTGGAGC

Flanking Amino Acid:

PSMWLAGHPYGLGHPSLHQG

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

0.22

1.2

52.4

43.3

Major PPT

87.9

0.85

0.7

80.5

31.6

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

50.8

0.01

1.8

65.24

40.2

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525