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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3759240_3759856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3759240 - 3759856

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTCGCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

ATGCCCTGACCT

Flanking Amino Acid:

YSWMQKKDEPMYSIKSAIEN

Intron Amino Acid Position:

1379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

67.4

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

64.7

0.33

0.9

54.7

35.1

Minor 5ss

37.9

-1.4

2.7

50.5

39.2

Minor BPS

54.6

0.22

1.8

73.03

43.4

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525