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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3760596_3762351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3760596 - 3762351

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GCTTGGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CCCACCTTGACC

Flanking Amino Acid:

ERGKSDSKSGKLSKSLLLSE

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

67.1

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

73.4

0.53

65.2

41.1

Minor 5ss

36.1

-1.6

3.5

47.8

42.2

Minor BPS

62.3

0.37

1.4

62.13

43.8

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525