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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3766768_3773846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3766768 - 3773846

Intron Length:

7079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTACTAGC

5'SS Class:

major

3'SS Sequence:

TTCTGCGTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGGTTTGTAATG

Flanking Amino Acid:

SDSSEDSFDQDSSSEEEEEE

Intron Amino Acid Position:

1729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

68.3

42.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

64.2

0.32

57.9

43.2

Minor 5ss

-1.4

2.5

47.1

41.1

Minor BPS

46.3

-0.4

49.16

39.6

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525