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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3776097_3776440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3776097 - 3776440

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTTTTTTAGCA

Flanking Amino Acid:

KGKDRKELNKRKKGKEAPCC

Intron Amino Acid Position:

1957

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

71.4

0.53

1.1

63.4

Major PPT

90.9

0.92

0.7

89.4

25.5

Minor 5ss

27.1

-2.6

42.4

Minor BPS

72.3

0.7

1.4

82.59

32.3

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525