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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3778053_3778324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3778053 - 3778324

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

AGTGTCTGACCG

Flanking Amino Acid:

GHVKTVHSPDIYRVVVEGER

Intron Amino Acid Position:

2095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.9

34.5

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

38.9

-1.2

53.8

43.7

Minor BPS

45.8

-0.4

1.9

50.81

43.4

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525