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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3778840_3779754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3778840 - 3779754

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CCCTAACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGAAA

U12 Branch Point Sequence:

TGCTCCCTAACC

Flanking Amino Acid:

RCLYPGTVVRGTLDLEEDGD

Intron Amino Acid Position:

2157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

44.2

Major BPS

53.7

0.09

1.4

64.3

39.6

Major PPT

0.45

0.9

62.1

33.3

Minor 5ss

31.1

-2.2

3.2

39.3

46.1

Minor BPS

68.4

0.56

1.7

76.32

39.7

Associated Gene:

Gene:

TNRC18

Ensembl Gene ID:

ENSAPLG00000028315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046974

3744700 - 3783224

38525